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  5. LOC_Os09g19980.1

LOC_Os09g19980.1 (LOC_Os09g19980)


Aliases : LOC_Os09g19980

Description : GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4i6|bpg2_arath : 348.0)


Gene families : OG0005393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g19980.1

Target Alias Description ECC score Gene Family Method Actions
AT4G10620 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 OrthoFinder output from all 47 species
Adi_g045220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G070100.1 Ceric.06G070100 not classified & original description: pacid=50620078... 0.08 OrthoFinder output from all 47 species
Dcu_g19887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025382001 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.04 OrthoFinder output from all 47 species
Gb_19145 No alias GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 OrthoFinder output from all 47 species
Len_g19651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006180.4.1 Solyc01g006180 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.07 OrthoFinder output from all 47 species
Tin_g28413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024057_P001 Zm00001e024057 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 327 406
No external refs found!