LOC_Os09g19830.1 (SDG23, SUVH6, LOC_Os09g19830)

Aliases : SDG23, SUVH6, LOC_Os09g19830

Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation

Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g19830.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g009904	SET22, SDG22, SUVH9	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Adi_g018540	SUVH3, SDG19	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Aev_g14466	SDG33, SUVH4, KYP	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Als_g01953	SUVH3, SDG19	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aob_g05317	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Aop_g06509	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene41391.t1	SDG33, SUVH4,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0303.g063783	SDG33, SUVH4, KYP	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Cre02.g089200	SDG23, SUVH6	Histone-lysine N-methyltransferase, H3 lysine-9 specific...	0.03	OrthoFinder output from all 47 species
Dac_g23404	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
GSVIVT01005913001	SUVH5, SGD9	Chromatin organisation.histone modifications.histone...	0.05	OrthoFinder output from all 47 species
GSVIVT01013881001	SUVH5, SGD9	Chromatin organisation.histone modifications.histone...	0.02	OrthoFinder output from all 47 species
Len_g22465	SUVH3, SDG19	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Len_g25857	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Msp_g12366	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Msp_g25542	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01190	SDG33, SUVH4, KYP	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Pir_g19950	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Pir_g20125	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ppi_g14651	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Sam_g27745	No alias	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Solyc10g077070.2.1	SUVH3, SDG19,...	class V/Su(var) histone methyltransferase component of...	0.04	OrthoFinder output from all 47 species
Spa_g15701	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Tin_g08561	SUVH3, SDG19	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Zm00001e004254_P001	SUVH5, SGD9,...	class V/Su(var) histone methyltransferase component of...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0008276	protein methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016278	lysine N-methyltransferase activity	None	Extended
MF	GO:0016279	protein-lysine N-methyltransferase activity	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	histone lysine N-methyltransferase activity	IEA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	IEA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042054	histone methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001214	SET_dom	1032	1173
IPR003105	SRA_YDG	737	892
IPR007728	Pre-SET_dom	917	1013

External Links

No external refs found!

LOC_Os09g19830.1 (SDG23, SUVH6, LOC_Os09g19830)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation