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  5. LOC_Os09g16160.1

LOC_Os09g16160.1 (LOC_Os09g16160)


Aliases : LOC_Os09g16160

Description : Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana (sp|q9zu96|y2168_arath : 99.8)


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g16160.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g09560.1 LOC_Os07g09560 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os07g34780.1 XBAT33, LOC_Os07g34780 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g12350.1 LOC_Os09g12350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g16180.1 LOC_Os09g16180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g16760.1 LOC_Os09g16760 Ankyrin repeat-containing protein At2g01680... 0.03 OrthoFinder output from all 47 species
LOC_Os11g08020.1 LOC_Os11g08020 Ankyrin repeat-containing protein At2g01680... 0.05 OrthoFinder output from all 47 species
LOC_Os11g14544.2 LOC_Os11g14544 Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
Lfl_g22109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 344 401
IPR020683 DUF3447 113 183
IPR026961 PGG_dom 515 626
No external refs found!