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  5. LOC_Os09g15240.1

LOC_Os09g15240.1 (ATCCD1, CCD1, NCED1,...)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1, LOC_Os09g15240

Description : Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus sativus (sp|q84kg5|ccd_crosa : 189.0)


Gene families : OG0003176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g15240.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00031380 NCED3, SIS7,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus sativus 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00032600 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus sativus 0.08 OrthoFinder output from all 47 species
Adi_g069290 CCD4, NCED4 zaxinone synthase *(ZAS) & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g079826 CCD4, NCED4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079827 No alias zaxinone synthase *(ZAS) & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g079828 ATCCD1, CCD1,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g085647 No alias zaxinone synthase *(ZAS) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g12228 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28552 No alias zaxinone synthase *(ZAS) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28603 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g33049 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16483.t1 NCED3, SIS7,... zaxinone synthase *(ZAS) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45741.t2 Aspi01Gene45741 zaxinone synthase *(ZAS) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40898 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g41734 CCD4, NCED4 zaxinone synthase *(ZAS) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035632001 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1... 0.04 OrthoFinder output from all 47 species
LOC_Os08g28240.1 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.04 OrthoFinder output from all 47 species
Mp8g04080.1 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.05 OrthoFinder output from all 47 species
Ore_g23022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23531 No alias zaxinone synthase *(ZAS) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25305 No alias zaxinone synthase *(ZAS) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g071227.1.1 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum... 0.04 OrthoFinder output from all 47 species
Spa_g38300 ATCCD1, CCD1,... zaxinone synthase *(ZAS) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033803_P002 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.09 OrthoFinder output from all 47 species
Zm00001e036424_P001 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 507 539
IPR004294 Carotenoid_Oase 92 489
No external refs found!