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  5. LOC_Os09g14870.1

LOC_Os09g14870.1 (LOC_Os09g14870)


Aliases : LOC_Os09g14870

Description : Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana (sp|q6aww5|y5262_arath : 97.8)


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g14870.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g35310.1 LOC_Os05g35310 Ankyrin repeat-containing protein At5g02620... 0.05 OrthoFinder output from all 47 species
LOC_Os08g31000.1 LOC_Os08g31000 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g16180.1 LOC_Os09g16180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g08020.1 LOC_Os11g08020 Ankyrin repeat-containing protein At2g01680... 0.05 OrthoFinder output from all 47 species
LOC_Os11g14544.2 LOC_Os11g14544 Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR026961 PGG_dom 494 546
IPR020683 DUF3447 120 216
IPR020683 DUF3447 333 426
No external refs found!