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  5. LOC_Os09g10980.1

LOC_Os09g10980.1 (WIP5, LOC_Os09g10980)


Aliases : WIP5, LOC_Os09g10980

Description : C2H2 zinc finger transcription factor


Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g10980.1

Target Alias Description ECC score Gene Family Method Actions
AT1G34790 TT1, WIP1 C2H2 and C2HC zinc fingers superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G20880 WIP4 WIP domain protein 4 0.01 OrthoFinder output from all 47 species
Aspi01Gene04309.t1 WIP2, NTT,... C2H2 subclass WIP transcription factor & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0011.g012566 WIP5 C2H2 subclass WIP transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ceric.24G008900.1 WIP2, NTT,... C2H2 subclass WIP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g06979 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01009046001 TT1, WIP1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 OrthoFinder output from all 47 species
GSVIVT01025301001 WIP2, NTT RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01033329001 WIP2, NTT RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Pnu_g12905 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.01 OrthoFinder output from all 47 species
Solyc06g074360.4.1 WIP3, Solyc06g074360 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!