LOC_Os09g08670.1 (LOC_Os09g08670)


Aliases : LOC_Os09g08670

Description : no hits & (original description: none)


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g08670.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00072820 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G29350 No alias Kinase-related protein of unknown function (DUF1296) 0.03 OrthoFinder output from all 47 species
Adi_g129391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07087 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene04421.t1 Aspi01Gene04421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001273 No alias not classified & original description: CDS=173-2680 0.03 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g60344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.07 OrthoFinder output from all 47 species
Ceric.27G004200.1 Ceric.27G004200 not classified & original description: pacid=50604818... 0.04 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.05 OrthoFinder output from all 47 species
Dac_g07091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021389001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00263 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_768428g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g06750.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g12571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023921 No alias not classified & original description: CDS=681-2798 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024848 No alias not classified & original description: CDS=93-2615 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026486 No alias not classified & original description: CDS=154-2919 0.04 OrthoFinder output from all 47 species
Sam_g13683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438753 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g005750.3.1 Solyc03g005750 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g018750.4.1 Solyc05g018750 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g045230.4.1 Solyc07g045230 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g37858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020237_P001 Zm00001e020237 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e022213_P003 Zm00001e022213 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e028004_P001 Zm00001e028004 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032451_P001 Zm00001e032451 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 8 67
No external refs found!