Aliases : RPOA, LOC_Os09g07910
Description : DNA-directed RNA polymerase subunit alpha OS=Oryza sativa subsp. japonica (sp|p0c500|rpoa_orysj : 306.0)
Gene families : OG0006820 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006820_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00740 | RPOA | RNA polymerase subunit alpha | 0.12 | OrthoFinder output from all 47 species | |
Aev_g02093 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.12 | OrthoFinder output from all 47 species | |
Cba_g60899 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.05G041900.1 | RPOA, Ceric.05G041900 | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.1 | OrthoFinder output from all 47 species | |
Ceric.1Z019700.1 | RPOA, Ceric.1Z019700 | not classified & original description: pacid=50586392... | 0.12 | OrthoFinder output from all 47 species | |
Ceric.38G008600.1 | RPOA, Ceric.38G008600 | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.11 | OrthoFinder output from all 47 species | |
Dcu_g20888 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024860001 | RPOA | DNA-directed RNA polymerase subunit alpha OS=Vitis vinifera | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g19118 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.07 | OrthoFinder output from all 47 species | |
Mpzg00720.1 | RPOA | RpoA core component plastid-encoded RNA polymerase | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g19365 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12462 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.12 | OrthoFinder output from all 47 species | |
Sam_g01699 | No alias | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.06 | OrthoFinder output from all 47 species | |
Solyc00g500029.1.1 | RPOA, Solyc00g500029 | DNA-directed RNA polymerase subunit alpha OS=Solanum... | 0.06 | OrthoFinder output from all 47 species | |
Solyc00g500074.1.1 | RPOA, Solyc00g500074 | DNA-directed RNA polymerase subunit alpha OS=Solanum... | 0.06 | OrthoFinder output from all 47 species | |
Solyc00g500157.1.1 | RPOA, Solyc00g500157 | RpoA core component plastid-encoded RNA polymerase | 0.11 | OrthoFinder output from all 47 species | |
Solyc01g017440.1.1 | RPOA, Solyc01g017440 | DNA-directed RNA polymerase subunit alpha OS=Solanum... | 0.08 | OrthoFinder output from all 47 species | |
Spa_g18101 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g20913 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |