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  5. LOC_Os09g05030.1

LOC_Os09g05030.1 (LOC_Os09g05030)


Aliases : LOC_Os09g05030

Description : no hits & (original description: none)


Gene families : OG0001298 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g05030.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00131410 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g021869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60740.t1 Aspi01Gene60740 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01138 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G045600.1 Ceric.01G045600 not classified & original description: pacid=50592054... 0.03 OrthoFinder output from all 47 species
GSVIVT01030505001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_11306 No alias Protein ARABIDILLO 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_26283 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_37022 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g46995.1 LOC_Os06g46995 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g07361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_183010g0010 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp6g12880.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13930 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014058 No alias not classified & original description: CDS=1-1695 0.04 OrthoFinder output from all 47 species
Solyc03g097740.1.1 Solyc03g097740 U-box domain-containing protein 4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e000119_P001 Zm00001e000119 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 322 359
No external refs found!