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  5. LOC_Os09g04990.1

LOC_Os09g04990.1 (Phox2, LOC_Os09g04990)


Aliases : Phox2, LOC_Os09g04990

Description : myosin adaptor protein (MadB)


Gene families : OG0001349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001349_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os09g04990.1

Target Alias Description ECC score Gene Family Method Actions
Solyc02g036360.1.1 Phox2, Solyc02g036360 myosin adaptor protein (MadB) 0.04 OrthoFinder output from all 47 species
Solyc02g081200.1.1 Phox2, Solyc02g081200 myosin adaptor protein (MadB) 0.03 OrthoFinder output from all 47 species
Spa_g16944 Phox2 myosin adaptor protein *(MadB) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017000_P001 Phox2, Zm00001e017000 myosin adaptor protein (MadB) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 305 397
No external refs found!