- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : FCA, LOC_Os09g03610
Description : no description available(sp|q6k271|fca_orysj : 775.0)
Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00046p00168380 | FCA,... | Flowering time control protein FCA OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g021978 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g32791 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g17585 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g24337 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g28529 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000420 | FCA | transcription factor *(FCA/SSF) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G023200.1 | FCA, Ceric.04G023200 | transcription factor *(FCA/SSF) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.06G016000.1 | Ceric.06G016000 | not classified & original description: pacid=50619514... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G007400.1 | FCA, Ceric.14G007400 | transcription factor *(FCA/SSF) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G065300.1 | RBP-DR1,... | not classified & original description: pacid=50575797... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g18569 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g43236 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07627 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09993 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13021 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19292 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01034966001 | FCA | Flowering time control protein FCA OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00863 | FCA | no description available(sp|b8bcz8|fca_orysi : 290.0) | 0.07 | OrthoFinder output from all 47 species | |
| Gb_05124 | FCA | no description available(sp|b8bcz8|fca_orysi : 224.0) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_12352 | FCA | Flowering time control protein FCA OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09308 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g22613 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06188 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17218 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_114047g0010 | FCA | Flowering time control protein FCA OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_5779g0010 | FCA | Flowering time control protein FCA OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g15600.1 | FCA | Flowering time control protein FCA OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g02118 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11080 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g08750 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19709 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12927 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13897 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g24304 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g08240 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g31456 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07218 | No alias | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g058450.3.1 | FCA, Solyc01g058450 | Flowering time control protein FCA OS=Arabidopsis... | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g26694 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g56153 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10875 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g19831 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g20389 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009433_P002 | FCA, Zm00001e009433 | no description available(sp|b8bcz8|fca_orysi : 625.0) | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
| No external refs found! |