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  5. LOC_Os09g02040.1

LOC_Os09g02040.1 (ORF154, LOC_Os09g02040)


Aliases : ORF154, LOC_Os09g02040

Description : no hits & (original description: none)


Gene families : OG0007021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g02040.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g09330.1 LOC_Os01g09330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g07860.1 LOC_Os02g07860 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g18530.1 ORF154, LOC_Os02g18530 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g32050.1 LOC_Os02g32050 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g25560.1 LOC_Os03g25560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g29330.1 LOC_Os03g29330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g31440.1 LOC_Os03g31440 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g13430.1 LOC_Os04g13430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g21680.1 LOC_Os06g21680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g09440.1 LOC_Os08g09440 Putative ribonuclease H protein At1g65750 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os09g38170.1 LOC_Os09g38170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g29450.1 LOC_Os10g29450 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g31300.1 LOC_Os10g31300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g03360.1 LOC_Os11g03360 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008531 riboflavin kinase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!