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  5. LOC_Os08g45230.1

LOC_Os08g45230.1 (LOC_Os08g45230)


Aliases : LOC_Os08g45230

Description : no hits & (original description: none)


Gene families : OG0003248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g45230.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT3G23350 No alias ENTH/VHS family protein 0.08 OrthoFinder output from all 47 species
Adi_g051524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51401.t2 Aspi01Gene51401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027838001 No alias No description available 0.09 OrthoFinder output from all 47 species
Len_g10587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015023 No alias not classified & original description: CDS=1-942 0.02 OrthoFinder output from all 47 species
Zm00001e003844_P001 Zm00001e003844 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e022008_P001 Zm00001e022008 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028774_P002 Zm00001e028774 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR013809 ENTH 30 155
No external refs found!