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  5. LOC_Os08g45080.1

LOC_Os08g45080.1 (LOC_Os08g45080)


Aliases : LOC_Os08g45080

Description : component MED15 of tail module of MEDIATOR transcription co-activator complex


Gene families : OG0001744 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001744_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g45080.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271750 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Aob_g05304 No alias component *(MED15) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ehy_g06721 No alias component *(MED15) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ehy_g22271 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_13858 No alias component MED15 of tail module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Mp8g02180.1 No alias component MED15 of tail module of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Pp3c4_28000V3.1 Pp3c4_28000 No annotation 0.02 OrthoFinder output from all 47 species
Zm00001e003860_P003 Zm00001e003860 component MED15 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR036546 MED15_KIX 35 114
No external refs found!