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Aliases : LOC_Os08g44830
Description : C2H2 zinc finger transcription factor
Gene families : OG0002003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002003_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os08g44830.1 | |
| Cluster | HCCA: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00140p00061590 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s05661p00002040 | STOP1,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G22890 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.06G007600.1 | STOP1, Ceric.06G007600 | C2H2-type subclass STOP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G007700.1 | STOP1, Ceric.06G007700 | C2H2-type subclass STOP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G011000.1 | STOP1, Ceric.06G011000 | C2H2-type subclass STOP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07437 | STOP1 | C2H2-type subclass STOP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g16795 | STOP1 | C2H2-type subclass STOP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01004847001 | STOP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031459001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01034505001 | STOP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_21302 | No alias | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g62230.1 | STOP1, LOC_Os03g62230 | C2H2 zinc finger transcription factor | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os04g08290.1 | LOC_Os04g08290 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g07280.1 | STOP1, LOC_Os12g07280 | C2H2 zinc finger transcription factor | 0.08 | OrthoFinder output from all 47 species | |
| Mp8g12510.1 | STOP1 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03138 | STOP1 | C2H2-type subclass STOP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g43533 | No alias | C2H2-type subclass STOP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g33678 | STOP1 | C2H2-type subclass STOP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11084 | STOP1 | C2H2-type subclass STOP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Smo58350 | STOP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.07 | OrthoFinder output from all 47 species | |
| Smo58353 | STOP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Smo68340 | STOP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g056320.3.1 | STOP1, Solyc04g056320 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g12910 | STOP1 | C2H2-type subclass STOP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003883_P001 | Zm00001e003883 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |