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  5. LOC_Os08g44760.1

LOC_Os08g44760.1 (LOC_Os08g44760)


Aliases : LOC_Os08g44760

Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana (sp|q9lx14|ufc_arath : 114.0)


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g44760.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00133150 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00089p00083270 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT2G28150 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
AT3G46110 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
AT5G10150 No alias Domain of unknown function (DUF966) 0.05 OrthoFinder output from all 47 species
Adi_g106265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g46581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08984.t1 Aspi01Gene08984 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18845.t1 Aspi01Gene18845 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58852.t1 Aspi01Gene58852 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010179 No alias not classified & original description: CDS=245-2059 0.06 OrthoFinder output from all 47 species
Ceric.10G058400.1 Ceric.10G058400 not classified & original description: pacid=50611779... 0.05 OrthoFinder output from all 47 species
Ceric.23G080300.1 Ceric.23G080300 not classified & original description: pacid=50610288... 0.04 OrthoFinder output from all 47 species
Dac_g16699 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g49111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35177 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g62200.1 LOC_Os01g62200 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g18739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3651g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g39402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04028 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000749 No alias not classified & original description: CDS=1079-3364 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017637 No alias not classified & original description: CDS=64-3537 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024671 No alias not classified & original description: CDS=409-2136 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026164 No alias not classified & original description: CDS=287-2665 0.03 OrthoFinder output from all 47 species
Sam_g48272 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g50494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo412562 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g09824 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g49772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003892_P002 Zm00001e003892 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Zm00001e005317_P002 Zm00001e005317 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e022043_P001 Zm00001e022043 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 48 469
No external refs found!