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  5. LOC_Os08g44620.1

LOC_Os08g44620.1 (LOC_Os08g44620)


Aliases : LOC_Os08g44620

Description : transcription factor (PLATZ)


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g44620.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00036780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
Als_g11638 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09518 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g29289 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29417 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001279001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.04 OrthoFinder output from all 47 species
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
LOC_Os02g07650.1 LOC_Os02g07650 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Lfl_g37520 No alias PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_10310g0010 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
MA_107063g0010 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
MA_12209g0020 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
MA_14971g0010 No alias transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Mp3g06190.1 No alias transcription factor (PLATZ) 0.04 OrthoFinder output from all 47 species
Pnu_g05358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07254 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c15_23190V3.1 Pp3c15_23190 PLATZ transcription factor family protein 0.01 OrthoFinder output from all 47 species
Ppi_g63891 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g008090.4.1 Solyc04g008090 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Tin_g07994 No alias PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 70 148
No external refs found!