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LOC_Os08g44390.1 (LOC_Os08g44390)


Aliases : LOC_Os08g44390

Description : Probable calcium-binding protein CML48 OS=Arabidopsis thaliana (sp|q9zqh1|cml48_arath : 150.0)


Gene families : OG0002864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g44390.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01203p00002490 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML49 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G10300 No alias Calcium-binding EF-hand family protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 153 181
IPR002048 EF_hand_dom 83 110
No external refs found!