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  5. LOC_Os08g43570.1

LOC_Os08g43570.1 (BGAL13, LOC_Os08g43570)


Aliases : BGAL13, LOC_Os08g43570

Description : beta-galactosidase (BGAL)


Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43570.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00198620 BGAL15,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00054p00149030 BGAL6, MUM2,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00138p00054750 BGAL13,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.09 OrthoFinder output from all 47 species
AT1G45130 BGAL5 beta-galactosidase 5 0.05 OrthoFinder output from all 47 species
AT2G16730 BGAL13 glycosyl hydrolase family 35 protein 0.04 OrthoFinder output from all 47 species
AT4G35010 BGAL11 beta-galactosidase 11 0.08 OrthoFinder output from all 47 species
AT4G36360 BGAL3 beta-galactosidase 3 0.02 OrthoFinder output from all 47 species
Aev_g13644 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27601 BGAL8 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0242.g059839 BGAL8 EC_3.2 glycosylase & original description: CDS=1-2406 0.02 OrthoFinder output from all 47 species
Dac_g09601 BGAL8 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12016 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09977 BGAL8 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27419 BGAL8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009791001 BGAL3 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01018853001 BGAL3 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01024031001 BGAL13 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01024221001 BGAL3 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
Gb_12091 BGAL1 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
LOC_Os06g42310.1 BGAL15, LOC_Os06g42310 beta-galactosidase (BGAL) 0.08 OrthoFinder output from all 47 species
Len_g37627 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_11388g0010 BGAL1 Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_14774g0010 BGAL8 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
MA_55965g0010 BGAL8 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
MA_65469g0020 BGAL8 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Nbi_g04951 BGAL1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35159 BGAL8 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011417 BGAL1 EC_3.2 glycosylase & original description: CDS=435-2606 0.02 OrthoFinder output from all 47 species
Sam_g26543 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g111540.4.1 BGAL13, Solyc01g111540 beta-galactosidase (BGAL) 0.1 OrthoFinder output from all 47 species
Solyc06g062580.3.1 BGAL1, Solyc06g062580 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Solyc10g055470.2.1 BGAL13, Solyc10g055470 beta-galactosidase (BGAL) 0.07 OrthoFinder output from all 47 species
Zm00001e000496_P002 BGAL3, Zm00001e000496 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Zm00001e010258_P001 BGAL11, Zm00001e010258 beta-galactosidase (BGAL) 0.04 OrthoFinder output from all 47 species
Zm00001e013679_P001 BGAL13, Zm00001e013679 Beta-galactosidase 12 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Zm00001e020528_P001 BGAL1, Zm00001e020528 beta-galactosidase (BGAL) 0.03 OrthoFinder output from all 47 species
Zm00001e024694_P002 BGAL13, Zm00001e024694 beta-galactosidase (BGAL) 0.08 OrthoFinder output from all 47 species
Zm00001e024944_P002 BGAL1, Zm00001e024944 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species
Zm00001e035986_P002 BGAL11, Zm00001e035986 beta-galactosidase (BGAL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 39 345
IPR000922 Lectin_gal-bd_dom 758 836
IPR041392 GHD 353 425
No external refs found!