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  5. LOC_Os08g43380.1

LOC_Os08g43380.1 (LOC_Os08g43380)


Aliases : LOC_Os08g43380

Description : RAB-GTPase-activating protein (RAB-GAP)


Gene families : OG0001800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43380.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0081.g038569 No alias Rab GTPase-activating protein & original description: CDS=53-1966 0.03 OrthoFinder output from all 47 species
LOC_Os09g35960.1 LOC_Os09g35960 RAB-GTPase-activating protein (RAB-GAP) 0.01 OrthoFinder output from all 47 species
Pir_g06684 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27537 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11911 No alias Rab GTPase-activating protein & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000976 No alias Rab GTPase-activating protein & original description:... 0.01 OrthoFinder output from all 47 species
Sam_g12215 No alias Rab GTPase-activating protein & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g09071 No alias Rab GTPase-activating protein & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 362 483
No external refs found!