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  5. LOC_Os08g43320.1

LOC_Os08g43320.1 (RBL2, ATRBL2, LOC_Os08g43320)


Aliases : RBL2, ATRBL2, LOC_Os08g43320

Description : protease (RBL)


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43320.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00195850 KOM,... Protein degradation.peptidase families.serine-type... 0.06 OrthoFinder output from all 47 species
AMTR_s00104p00044730 RBL1, ATRBL1,... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT1G52580 RBL5, ATRBL5 RHOMBOID-like protein 5 0.03 OrthoFinder output from all 47 species
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.06 OrthoFinder output from all 47 species
AT1G77860 KOM Rhomboid-related intramembrane serine protease family protein 0.04 OrthoFinder output from all 47 species
Adi_g108099 RBL2, ATRBL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01691 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05510 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g39472 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02521 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28615.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28631.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0183.g056478 RBL1, ATRBL1 protease *(RBL) & original description: CDS=777-1763 0.03 OrthoFinder output from all 47 species
Cba_g58611 RBL1, ATRBL1 protease *(RBL) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.13G018300.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50636147... 0.03 OrthoFinder output from all 47 species
Dac_g04619 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g20994 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01404 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06691 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06776 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25784 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008957001 KOM Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder output from all 47 species
GSVIVT01010602001 RBL2, ATRBL2 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01017301001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01034160001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os10g37760.1 RBL2, ATRBL2,... protease (RBL) 0.05 OrthoFinder output from all 47 species
Len_g13142 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24417 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06970 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00600 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24929 RBL3, ATRBL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00556 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00696 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09180 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10257 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12850 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30805 RBL4, ATRBL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43017 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61050 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010272 RBL1, ATRBL1 protease *(RBL) & original description: CDS=374-1408 0.04 OrthoFinder output from all 47 species
Solyc06g005580.4.1 RBL1, ATRBL1,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Solyc09g010880.3.1 RBL1, ATRBL1,... protease (RBL) 0.01 OrthoFinder output from all 47 species
Solyc10g050105.1.1 KOM, Solyc10g050105 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g013320.2.1 KOM, Solyc11g013320 protease (RBL) 0.04 OrthoFinder output from all 47 species
Spa_g11810 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57345 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02797 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14488 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000111_P001 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Zm00001e002140_P002 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species
Zm00001e007219_P001 RBL2, ATRBL2,... protease (RBL) 0.02 OrthoFinder output from all 47 species
Zm00001e010203_P002 RBL2, ATRBL2,... protease (RBL) 0.02 OrthoFinder output from all 47 species
Zm00001e024265_P001 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 107 250
No external refs found!