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  5. LOC_Os08g43290.1

LOC_Os08g43290.1 (LOC_Os08g43290)


Aliases : LOC_Os08g43290

Description : no hits & (original description: none)


Gene families : OG0002638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43290.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00099640 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00005p00101720 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00224500 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00110230 evm_27.TU.AmTr_v1... Protein MEN-8 OS=Silene latifolia 0.02 OrthoFinder output from all 47 species
AT5G07230 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
Aop_g14820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g24129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G064700.1 Ceric.07G064700 not classified & original description: pacid=50625967... 0.03 OrthoFinder output from all 47 species
Dcu_g18333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_27177 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g41120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14335 No alias type-III lipid transfer protein *(LTP-III) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g24604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40422 No alias type-III lipid transfer protein *(LTP-III) & original... 0.03 OrthoFinder output from all 47 species
Ore_g40423 No alias type-III lipid transfer protein *(LTP-III) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g08075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo425085 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g009590.3.1 Solyc01g009590 Protein 108 OS=Solanum lycopersicum (sp|q43495|108_sollc : 89.4) 0.02 OrthoFinder output from all 47 species
Solyc01g086830.4.1 Solyc01g086830 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g026115.1.1 Solyc03g026115 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g035820.1.1 Solyc06g035820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g40221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!