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  5. LOC_Os08g43050.1

LOC_Os08g43050.1 (LOC_Os08g43050)


Aliases : LOC_Os08g43050

Description : Putative disease resistance protein RGA1 OS=Solanum bulbocastanum (sp|q7xa42|rga1_solbu : 459.0)


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g43050.1

Target Alias Description ECC score Gene Family Method Actions
AT3G14470 No alias NB-ARC domain-containing disease resistance protein 0.08 OrthoFinder output from all 47 species
GSVIVT01000634001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.05 OrthoFinder output from all 47 species
GSVIVT01000635001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01000642001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01000656001 HRT, RCY1, RPP8 Putative disease resistance protein At3g14460... 0.04 OrthoFinder output from all 47 species
GSVIVT01000663001 No alias Putative disease resistance protein At3g14460... 0.02 OrthoFinder output from all 47 species
GSVIVT01000666001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.04 OrthoFinder output from all 47 species
GSVIVT01000668001 No alias Disease resistance protein RGA2 OS=Solanum bulbocastanum 0.04 OrthoFinder output from all 47 species
GSVIVT01000842001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01001399001 RLK1 G-type lectin S-receptor-like serine/threonine-protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01001457001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01001469001 No alias Disease resistance protein RGA2 OS=Solanum bulbocastanum 0.04 OrthoFinder output from all 47 species
GSVIVT01001473001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01006243001 No alias Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
GSVIVT01011193001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01012443001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01013307001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01013508001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.02 OrthoFinder output from all 47 species
GSVIVT01013535001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01022832001 No alias Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
GSVIVT01022837001 No alias Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
GSVIVT01022851001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01022856001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01022931001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01022937001 No alias Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01023312001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01027229001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01027270001 No alias Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
GSVIVT01031998001 No alias Putative disease resistance protein At3g14460... 0.04 OrthoFinder output from all 47 species
GSVIVT01032169001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01034675001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01036628001 RPM1, RPS3 Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01036657001 No alias Putative disease resistance RPP13-like protein 1... 0.06 OrthoFinder output from all 47 species
GSVIVT01038298001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os01g17130.1 LOC_Os01g17130 Putative disease resistance protein At3g14460... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43340.1 LOC_Os04g43340 Putative disease resistance RPP13-like protein 1... 0.08 OrthoFinder output from all 47 species
LOC_Os06g41480.1 LOC_Os06g41480 Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os07g17220.1 LOC_Os07g17220 Putative disease resistance protein At3g14460... 0.08 OrthoFinder output from all 47 species
LOC_Os07g17250.1 LOC_Os07g17250 Putative disease resistance protein At3g14460... 0.08 OrthoFinder output from all 47 species
LOC_Os09g14490.1 LOC_Os09g14490 Putative disease resistance RPP13-like protein 1... 0.08 OrthoFinder output from all 47 species
LOC_Os10g07400.2 LOC_Os10g07400 Putative disease resistance protein RGA1 OS=Solanum... 0.03 OrthoFinder output from all 47 species
LOC_Os11g29110.1 LOC_Os11g29110 Putative disease resistance protein RGA4 OS=Solanum... 0.05 OrthoFinder output from all 47 species
LOC_Os12g03750.1 LOC_Os12g03750 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.05 OrthoFinder output from all 47 species
LOC_Os12g32680.1 LOC_Os12g32680 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.02 OrthoFinder output from all 47 species
Solyc02g030280.2.1 Solyc02g030280 Putative disease resistance protein RGA4 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Zm00001e020954_P001 Zm00001e020954 Putative disease resistance protein RGA4 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Zm00001e027057_P001 Zm00001e027057 Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e031999_P001 Zm00001e031999 Putative disease resistance protein RGA3 OS=Solanum... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 206 440
IPR041118 Rx_N 38 125
No external refs found!