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  5. LOC_Os08g42740.3

LOC_Os08g42740.3 (ARI8, ATARI8, LOC_Os08g42740)


Aliases : ARI8, ATARI8, LOC_Os08g42740

Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG0001677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42740.3

Target Alias Description ECC score Gene Family Method Actions
AT2G31510 ARI7, ATARI7 IBR domain-containing protein 0.05 OrthoFinder output from all 47 species
Cba_g33391 ARI7, ATARI7 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01003757001 ARI8, ATARI8 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01010742001 ARI8, ATARI8 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Sam_g37809 No alias RBR-Ariadne-class E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007730_P001 ARI8, ATARI8,... RBR-Ariadne-class E3 ubiquitin ligase 0.02 OrthoFinder output from all 47 species
Zm00001e024244_P001 ARI8, ATARI8,... RBR-Ariadne-class E3 ubiquitin ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002867 IBR_dom 302 350
IPR002867 IBR_dom 225 285
No external refs found!