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  5. LOC_Os08g42590.3

LOC_Os08g42590.3 (LOC_Os08g42590)


Aliases : LOC_Os08g42590

Description : no hits & (original description: none)


Gene families : OG0001547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42590.3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00236400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G61820 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
Adi_g014737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05562 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g40784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12480 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene17202.t1 Aspi01Gene17202 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17206.t1 Aspi01Gene17206 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G063800.1 Ceric.23G063800 not classified & original description: pacid=50609651... 0.03 OrthoFinder output from all 47 species
Ceric.23G063900.1 Ceric.23G063900 not classified & original description: pacid=50610950... 0.02 OrthoFinder output from all 47 species
Ehy_g11870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g36016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01359 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g25260.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g02398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44779 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g32932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo75188 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc12g042380.2.1 Solyc12g042380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
CC GO:0019008 molybdopterin synthase complex IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR011692 Stress_up-reg_Nod19 32 397
No external refs found!