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  5. LOC_Os08g42380.1

LOC_Os08g42380.1 (LOC_Os08g42380)


Aliases : LOC_Os08g42380

Description : component Tim8 of inner mitochondrion membrane TIM22 insertion system


Gene families : OG0002244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g42380.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00198440 evm_27.TU.AmTr_v1... Protein translocation.mitochondrion.inner mitochondrion... 0.06 OrthoFinder output from all 47 species
AT1G61570 TIM13 translocase of the inner mitochondrial membrane 13 0.1 OrthoFinder output from all 47 species
AT5G50810 TIM8 translocase inner membrane subunit 8 0.09 OrthoFinder output from all 47 species
Ala_g35680 No alias component *(Tim13) of inner mitochondrion membrane TIM22... 0.04 OrthoFinder output from all 47 species
Als_g18297 No alias component *(Tim13) of inner mitochondrion membrane TIM22... 0.02 OrthoFinder output from all 47 species
Aob_g42122 TIM8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043565 TIM8 component *(Tim8) of inner mitochondrion membrane TIM22... 0.05 OrthoFinder output from all 47 species
Ceric.13G049400.1 TIM8, Ceric.13G049400 component *(Tim8) of inner mitochondrion membrane TIM22... 0.04 OrthoFinder output from all 47 species
Ceric.32G011900.1 TIM13, Ceric.32G011900 component *(Tim13) of inner mitochondrion membrane TIM22... 0.05 OrthoFinder output from all 47 species
Dac_g46325 TIM13 component *(Tim13) of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
GSVIVT01008600001 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.1 OrthoFinder output from all 47 species
GSVIVT01019698001 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.03 OrthoFinder output from all 47 species
Gb_35115 No alias component Tim8 of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
MA_119926g0010 TIM8 component Tim8 of inner mitochondrion membrane TIM22... 0.05 OrthoFinder output from all 47 species
MA_15606g0010 TIM13 component Tim13 of inner mitochondrion membrane TIM22... 0.02 OrthoFinder output from all 47 species
Mp2g07600.1 No alias component Tim13 of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
Mp3g04200.1 No alias component Tim8 of inner mitochondrion membrane TIM22... 0.02 OrthoFinder output from all 47 species
Nbi_g11345 No alias component *(Tim13) of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
Ore_g30075 TIM8 component *(Tim8) of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
Smo228905 No alias Protein translocation.mitochondrion.inner mitochondrion... 0.09 OrthoFinder output from all 47 species
Smo82076 TIM8 Protein translocation.mitochondrion.inner mitochondrion... 0.09 OrthoFinder output from all 47 species
Solyc03g097640.3.1 TIM8, Solyc03g097640 component Tim8 of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
Solyc06g072600.3.1 TIM8, Solyc06g072600 component Tim8 of inner mitochondrion membrane TIM22... 0.06 OrthoFinder output from all 47 species
Solyc08g083380.2.1 TIM13, Solyc08g083380 component Tim13 of inner mitochondrion membrane TIM22... 0.08 OrthoFinder output from all 47 species
Zm00001e003692_P001 TIM8, Zm00001e003692 component Tim8 of inner mitochondrion membrane TIM22... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004217 Tim10-like 23 83
No external refs found!