LOC_Os09g02780 (Os09g0116000)


Aliases : Os09g0116000

Description : No description available


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os09g02780
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT2G22630 AGL17 AGAMOUS-like 17 0.02 Gene family
AT4G11880 AGL14 AGAMOUS-like 14 0.03 Gene family
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.02 Gene family
AT5G60440 AGL62 AGAMOUS-like 62 0.03 Gene family
GSVIVT01002442001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
GSVIVT01008139001 No alias 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
GSVIVT01008140001 No alias 33.99 development.unspecified MADS box gene negatively... 0.03 Gene family
GSVIVT01008560001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01010221001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01012110001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01012250001 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
GSVIVT01018450001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01022182001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01026207001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01033253001 No alias No description available 0.01 Gene family
GSVIVT01037031001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os02g45770 Os02g0682200 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os03g03100 Os03g0122600 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
LOC_Os04g23910 Os04g0304400 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os04g49150 Os04g0580700 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os06g45650 Os06g0667200 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
LOC_Os07g41370 Os07g0605200 33.99 development.unspecified MADS box gene negatively... 0.03 Gene family
MA_211156g0010 No alias 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
MA_25342g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
MA_6805g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Smo235487 PACid_15406183 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Smo5960 PACid_15422574 No description available 0.02 Gene family
Solyc06g064840.3.1 Solyc06g064840.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc10g080030.2.1 Solyc10g080030.2 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Zm00001d006094 GRMZM2G129034 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d008882 GRMZM2G359952 33.99 development.unspecified Floral homeotic gene... 0.04 Gene family
Zm00001d013259 GRMZM2G553379 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Zm00001d015381 GRMZM2G130382 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d017614 GRMZM2G160565 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d021057 GRMZM2G097059 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d023955 GRMZM2G010669 33.99 development.unspecified One of two genes (SHP1 and... 0.05 Gene family
Zm00001d028217 GRMZM2G032070,... 33.99 development.unspecified MADS-box protein, binds K... 0.02 Gene family
Zm00001d031620 GRMZM2G159397 27.3.24 RNA.regulation of transcription.MADS box... 0.05 Gene family
Zm00001d037737 GRMZM2G052890 33.99 development.unspecified Floral homeotic gene... 0.04 Gene family
Zm00001d039434 GRMZM2G471089 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
Zm00001d041781 GRMZM2G160687 33.99 development.unspecified AGAMOUS [AG]-like MADS box... 0.04 Gene family
Zm00001d044899 GRMZM5G814279 No description available 0.02 Gene family
Zm00001d048082 GRMZM2G102161 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d051465 GRMZM2G003514 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 2 43
No external refs found!