1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g41440.1

LOC_Os08g41440.1 (GAE6, LOC_Os08g41440)


Aliases : GAE6, LOC_Os08g41440

Description : UDP-D-glucuronic acid 4-epimerase


Gene families : OG0000504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g41440.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00257170 GAE6,... Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00132110 GAE1,... Carbohydrate metabolism.nucleotide sugar... 0.06 OrthoFinder output from all 47 species
AT4G30440 GAE1 UDP-D-glucuronate 4-epimerase 1 0.04 OrthoFinder output from all 47 species
Adi_g116341 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05938 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12135 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17233 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37648 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09458 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47972 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g03169 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01238 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02563 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04335 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19266.t1 GAE1, Aspi01Gene19266 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53433.t1 GAE1, Aspi01Gene53433 UDP-D-glucuronic acid 4-epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0364.g066943 GAE2 UDP-D-glucuronic acid 4-epimerase & original... 0.03 OrthoFinder output from all 47 species
Cba_g13677 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08608 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14249 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33060 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15331 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g46325 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02206 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12150 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03704 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05737 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018554001 GAE2 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Gb_06410 GAE2 UDP-D-glucuronic acid 4-epimerase 0.05 OrthoFinder output from all 47 species
Gb_17539 GAE1 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
Len_g07701 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46971 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Mp2g22600.1 GAE1 UDP-D-glucuronic acid 4-epimerase 0.02 OrthoFinder output from all 47 species
Msp_g07788 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12614 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48023 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04262 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12652 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18487 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38572 GAE2 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38573 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02240 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09520 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12690 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17123 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61485 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003994 GAE2 UDP-D-glucuronic acid 4-epimerase & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007075 GAE1 UDP-D-glucuronic acid 4-epimerase & original... 0.02 OrthoFinder output from all 47 species
Solyc09g092330.3.1 GAE6, Solyc09g092330 UDP-D-glucuronic acid 4-epimerase 0.05 OrthoFinder output from all 47 species
Solyc10g018260.1.1 GAE3, Solyc10g018260 UDP-D-glucuronic acid 4-epimerase 0.02 OrthoFinder output from all 47 species
Spa_g06270 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10357 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14885 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05525 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016096_P001 GAE1, Zm00001e016096 UDP-D-glucuronic acid 4-epimerase 0.02 OrthoFinder output from all 47 species
Zm00001e036291_P001 GAE1, Zm00001e036291 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 126 361
No external refs found!