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  5. LOC_Os08g41300.1

LOC_Os08g41300.1 (LOC_Os08g41300)


Aliases : LOC_Os08g41300

Description : component RPL32 of LSU proteome component


Gene families : OG0001000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g41300.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT4G18100 No alias Ribosomal protein L32e 0.18 OrthoFinder output from all 47 species
AT5G46430 No alias Ribosomal protein L32e 0.11 OrthoFinder output from all 47 species
Adi_g018844 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g018845 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Adi_g018846 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g030118 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Adi_g126327 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g126879 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aev_g21051 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g32062 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.14 OrthoFinder output from all 47 species
Ala_g37942 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Als_g10549 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Als_g24582 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Als_g31659 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Als_g44599 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Als_g59277 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aob_g00438 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g06322 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g00898 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Aop_g13748 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g17104 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g17117 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g20751 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g50189 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene22038.t1 Aspi01Gene22038 component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0030.g024411 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Azfi_s0061.g035078 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Cba_g21008 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Cba_g28503 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g36412 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g75321 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g76971 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.22G081000.1 Ceric.22G081000 component *(eL32) of large ribosomal-subunit (LSU)... 0.2 OrthoFinder output from all 47 species
Ceric.39G032400.1 Ceric.39G032400 component *(eL32) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.140 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 OrthoFinder output from all 47 species
Cre06.g289550 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 OrthoFinder output from all 47 species
Dac_g04434 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Dac_g18095 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Dac_g27003 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Dcu_g24494 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Dcu_g29830 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g35048 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g35080 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Dde_g04107 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ehy_g18228 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
GSVIVT01005150001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder output from all 47 species
GSVIVT01021377001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.28 OrthoFinder output from all 47 species
Gb_36437 No alias component RPL32 of LSU proteome component 0.13 OrthoFinder output from all 47 species
Len_g02010 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g05818 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g14525 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g21979 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
MA_10434621g0010 No alias component RPL32 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_41569g0010 No alias component RPL32 of LSU proteome component 0.13 OrthoFinder output from all 47 species
Mp7g12480.1 No alias component RPL32 of LSU proteome component 0.18 OrthoFinder output from all 47 species
Msp_g02643 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Msp_g34354 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Msp_g35436 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Nbi_g10419 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Nbi_g10779 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ore_g41192 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g03230 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g13764 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pir_g55034 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g61740 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Pnu_g25464 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c14_10580V3.1 Pp3c14_10580 Ribosomal protein L32e 0.05 OrthoFinder output from all 47 species
Pp3c1_32490V3.1 Pp3c1_32490 Ribosomal protein L32e 0.09 OrthoFinder output from all 47 species
Pp3c2_9590V3.1 Pp3c2_9590 Ribosomal protein L32e 0.11 OrthoFinder output from all 47 species
Ppi_g07828 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g20685 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g23349 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g26022 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g34312 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g47089 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ppi_g52088 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0258.g026846 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g10755 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g12910 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g14494 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g30727 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g30905 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g39443 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Sam_g47289 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo146656 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder output from all 47 species
Solyc02g070310.3.1 Solyc02g070310 component RPL32 of LSU proteome component 0.16 OrthoFinder output from all 47 species
Solyc02g150130.1.1 Solyc02g150130 component RPL32 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc08g006900.3.1 Solyc08g006900 component RPL32 of LSU proteome component 0.26 OrthoFinder output from all 47 species
Spa_g02483 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g11641 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Spa_g17123 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Spa_g21119 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Spa_g34311 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g36775 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Spa_g41176 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Tin_g00154 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Tin_g11973 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Tin_g17904 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Zm00001e003623_P002 Zm00001e003623 component RPL32 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Zm00001e010105_P002 Zm00001e010105 component RPL32 of LSU proteome component 0.11 OrthoFinder output from all 47 species
Zm00001e021938_P001 Zm00001e021938 component RPL32 of LSU proteome component 0.27 OrthoFinder output from all 47 species
Zm00001e034604_P001 Zm00001e034604 component RPL32 of LSU proteome component 0.2 OrthoFinder output from all 47 species
Zm00001e034606_P001 Zm00001e034606 component RPL32 of LSU proteome component 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001515 Ribosomal_L32e 16 122
No external refs found!