Aliases : ARF19, IAA22, ARF11, LOC_Os08g40900
Description : transcription factor (ARF)
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os08g40900.1 | |
Cluster | HCCA: Cluster_51 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g107312 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g11735 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.07G060200.1 | ARF16, Ceric.07G060200 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g05759 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g32674 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008639001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
Len_g08347 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g07104 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10022392g0010 | ARF6 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
MA_103763g0010 | ARF6 | Auxin response factor 6 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
MA_85955g0020 | ARF19, IAA22, ARF11 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Pir_g41869 | ARF17 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo181406 | ARF6 | RNA biosynthesis.transcriptional activation.B3... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e013191_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |