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Aliases : SE, LOC_Os08g40560
Description : C2H2 zinc finger transcription factor. component SERRATE of DCL1-HYL1 miRNA biogenesis complex
Gene families : OG0003096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os08g40560.1 | |
| Cluster | HCCA: Cluster_143 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g061118 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g087436 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g05956 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene05173.t1 | SE, Aspi01Gene05173 | component *(SERRATE) of DCL1-HYL1 miRNA bioGenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene07777.t1 | SE, Aspi01Gene07777 | component *(SERRATE) of DCL1-HYL1 miRNA bioGenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G039000.1 | SE, Ceric.03G039000 | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Cre13.g575900 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g23090.1 | SE | C2H2 zinc finger transcription factor. component SERRATE... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g00688 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10038 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36418 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g04707 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62657 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g009090.3.1 | SE, Solyc01g009090 | C2H2 zinc finger transcription factor. component SERRATE... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54768 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013155_P002 | SE, Zm00001e013155 | C2H2 zinc finger transcription factor. component SERRATE... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| No external refs found! |