Aliases : MEF19, LOC_Os08g40020
Description : RNA editing factor (MEF19)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os08g40020.1 | |
Cluster | HCCA: Cluster_176 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00263110 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00008p00241920 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00011p00233950 | No alias | Pentatricopeptide repeat-containing protein At4g37170... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00029p00062590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00039p00023570 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00057p00151990 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00062p00213230 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00083p00015670 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00084p00089150 | OTP86,... | Pentatricopeptide repeat-containing protein At3g63370,... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00155p00018120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
AT1G09410 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.08 | OrthoFinder output from all 47 species | |
AT1G31430 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
AT1G69350 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.1 | OrthoFinder output from all 47 species | |
AT2G13600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G02010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.14 | OrthoFinder output from all 47 species | |
AT3G03580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G13880 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT4G14850 | LOI1, MEF11 | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
AT4G18520 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G37170 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.12 | OrthoFinder output from all 47 species | |
AT5G09950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT5G27110 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
Solyc01g006920.4.1 | Solyc01g006920 | Pentatricopeptide repeat-containing protein At4g39530... | 0.07 | OrthoFinder output from all 47 species | |
Solyc01g090510.2.1 | Solyc01g090510 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g110010.3.1 | Solyc01g110010 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g014360.3.1 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g065030.1.1 | EMB2758, Solyc02g065030 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g068630.1.1 | Solyc02g068630 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
Solyc03g063690.1.1 | MEF1, Solyc03g063690 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g093630.3.1 | CRR2, Solyc03g093630 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g097850.1.1 | Solyc03g097850 | Pentatricopeptide repeat-containing protein At5g16860... | 0.05 | OrthoFinder output from all 47 species | |
Solyc03g116000.1.1 | Solyc03g116000 | Pentatricopeptide repeat-containing protein At3g47530... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g119120.3.1 | Solyc03g119120 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g009000.1.1 | Solyc04g009000 | RNA editing factor (SLO2) | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g063300.3.1 | Solyc04g063300 | Pentatricopeptide repeat-containing protein At3g26540... | 0.05 | OrthoFinder output from all 47 species | |
Solyc04g074160.3.1 | Solyc04g074160 | Putative pentatricopeptide repeat-containing protein... | 0.08 | OrthoFinder output from all 47 species | |
Solyc04g076330.3.1 | CRR22, Solyc04g076330 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g009400.3.1 | Solyc05g009400 | Pentatricopeptide repeat-containing protein At3g29230... | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g012630.2.1 | Solyc05g012630 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g009500.1.1 | Solyc06g009500 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g053850.4.1 | Solyc06g053850 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g069700.4.1 | Solyc06g069700 | Pentatricopeptide repeat-containing protein At5g61400... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g082880.2.1 | Solyc06g082880 | RNA editing factor (MEF13) | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g084580.1.1 | Solyc06g084580 | Pentatricopeptide repeat-containing protein At4g20770... | 0.06 | OrthoFinder output from all 47 species | |
Solyc07g042760.1.1 | Solyc07g042760 | Pentatricopeptide repeat-containing protein At4g31070,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g055310.1.1 | Solyc07g055310 | Pentatricopeptide repeat-containing protein At2g41080... | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g023640.1.1 | Solyc08g023640 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g009950.4.1 | Solyc09g009950 | RNA editing factor (MEF10) | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g010070.1.1 | EMB2758, Solyc09g010070 | Pentatricopeptide repeat-containing protein At4g33990... | 0.12 | OrthoFinder output from all 47 species | |
Solyc09g065710.1.1 | OTP86, Solyc09g065710 | RNA editing factor (OTP86) | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g005970.1.1 | Solyc11g005970 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.06 | OrthoFinder output from all 47 species | |
Solyc11g008940.1.1 | CRR2, Solyc11g008940 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g008970.1.1 | Solyc11g008970 | Pentatricopeptide repeat-containing protein At4g39952,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g017290.1.1 | Solyc11g017290 | Pentatricopeptide repeat-containing protein At1g31430... | 0.06 | OrthoFinder output from all 47 species | |
Solyc11g067210.1.1 | Solyc11g067210 | Pentatricopeptide repeat-containing protein At2g27610... | 0.06 | OrthoFinder output from all 47 species | |
Solyc12g099620.1.1 | Solyc12g099620 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e003562_P001 | REME1, Zm00001e003562 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e011519_P001 | Zm00001e011519 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e013211_P001 | OTP82, Zm00001e013211 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015727_P001 | Zm00001e015727 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e016923_P001 | CRR2, Zm00001e016923 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e018346_P001 | Zm00001e018346 | Pentatricopeptide repeat-containing protein At3g29230... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e018565_P001 | Zm00001e018565 | Pentatricopeptide repeat-containing protein At3g13880... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e021026_P001 | Zm00001e021026 | Pentatricopeptide repeat-containing protein At1g09190... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e030605_P001 | Zm00001e030605 | Pentatricopeptide repeat-containing protein At1g31430... | 0.17 | OrthoFinder output from all 47 species | |
Zm00001e036301_P001 | Zm00001e036301 | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
No external refs found! |