LOC_Os08g39550.1 (LOC_Os08g39550)


Aliases : LOC_Os08g39550

Description : DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana (sp|q00874|dr100_arath : 380.0)


Gene families : OG0000133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g39550.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00120p00057210 EFR,... LRR receptor-like serine/threonine-protein kinase EFR... 0.04 OrthoFinder output from all 47 species
AT1G33670 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT2G34930 No alias disease resistance family protein / LRR family protein 0.02 OrthoFinder output from all 47 species
AT3G12610 DRT100 Leucine-rich repeat (LRR) family protein 0.07 OrthoFinder output from all 47 species
AT3G20820 No alias Leucine-rich repeat (LRR) family protein 0.09 OrthoFinder output from all 47 species
AT5G12940 No alias Leucine-rich repeat (LRR) family protein 0.08 OrthoFinder output from all 47 species
Adi_g007126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083000 RLP31, AtRLP31 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35578 EFR not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38726 ATPSKR1, PSKR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65513.t1 AtRLP30, RLP30,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G001000.1 Ceric.11G001000 not classified & original description: pacid=50595413... 0.04 OrthoFinder output from all 47 species
Ceric.11G003600.1 Ceric.11G003600 not classified & original description: pacid=50596383... 0.03 OrthoFinder output from all 47 species
Ceric.11G003700.1 Ceric.11G003700 not classified & original description: pacid=50596712... 0.03 OrthoFinder output from all 47 species
Ceric.11G003900.1 ATPSKR1, PSKR1,... not classified & original description: pacid=50596696... 0.03 OrthoFinder output from all 47 species
Ceric.11G004000.1 ATPSKR1, PSKR1,... not classified & original description: pacid=50594977... 0.03 OrthoFinder output from all 47 species
Ehy_g15146 AtRLP30, RLP30 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018835001 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.04 OrthoFinder output from all 47 species
GSVIVT01028766001 No alias Receptor-like protein EIX1 OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
GSVIVT01028780001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032973001 CLI1, RPK2, TOAD2 LRR receptor-like serine/threonine-protein kinase RPK2... 0.04 OrthoFinder output from all 47 species
GSVIVT01034362001 No alias Receptor-like protein kinase 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01037229001 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.04 OrthoFinder output from all 47 species
Gb_01061 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.03 OrthoFinder output from all 47 species
Gb_05286 No alias Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_11560 No alias LRR receptor-like serine/threonine-protein kinase GSO1... 0.02 OrthoFinder output from all 47 species
Gb_14890 No alias Probable leucine-rich repeat receptor-like protein... 0.03 OrthoFinder output from all 47 species
Gb_16966 No alias Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_21564 ATPSKR1, PSKR1 Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_22857 RLP48, AtRLP48 Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_22859 RLP48, AtRLP48 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_22875 RLP48, AtRLP48 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_26564 AtRLP6, RLP6 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Gb_34782 No alias MDIS1-interacting receptor like kinase 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_34850 RLP26, AtRLP26 Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Gb_37822 No alias Probable leucine-rich repeat receptor-like protein... 0.03 OrthoFinder output from all 47 species
Gb_39677 FLS2 Probable LRR receptor-like serine/threonine-protein... 0.02 OrthoFinder output from all 47 species
Len_g08840 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g26176 No alias PNP peptide receptor *(PNP-R) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434564g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_11280g0010 No alias Probable leucine-rich repeat receptor-like protein... 0.02 OrthoFinder output from all 47 species
MA_175654g0010 No alias Probable leucine-rich repeat receptor-like protein... 0.02 OrthoFinder output from all 47 species
MA_19613g0010 RLP26, AtRLP26 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
MA_6800g0010 No alias Leucine-rich repeat receptor-like... 0.03 OrthoFinder output from all 47 species
MA_84450g0010 FLS2 CIF-peptide receptor (GSO) 0.02 OrthoFinder output from all 47 species
MA_953128g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g09700.1 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.04 OrthoFinder output from all 47 species
Mp1g23650.1 NIK3 LRR receptor-like serine/threonine-protein kinase GSO1... 0.05 OrthoFinder output from all 47 species
Mp3g25060.1 RLP7, AtRLP7 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g03660.1 GSO2, EDA23 LRR receptor-like serine/threonine-protein kinase GSO1... 0.03 OrthoFinder output from all 47 species
Mp4g21430.1 No alias LRR receptor-like serine/threonine-protein kinase FLS2... 0.07 OrthoFinder output from all 47 species
Mp5g13350.1 RLP32, AtRLP32 Probably inactive leucine-rich repeat receptor-like... 0.04 OrthoFinder output from all 47 species
Mp5g17780.1 No alias Probable leucine-rich repeat receptor-like protein... 0.03 OrthoFinder output from all 47 species
Ore_g13722 EFR not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23051 AtRLP6, RLP6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000694 No alias not classified & original description: CDS=1-588 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016913 BAM1 not classified & original description: CDS=1-483 0.03 OrthoFinder output from all 47 species
Smo405170 SRF1 Probable LRR receptor-like serine/threonine-protein... 0.05 OrthoFinder output from all 47 species
Solyc01g086920.3.1 Solyc01g086920 DNA damage-repair/toleration protein DRT100... 0.02 OrthoFinder output from all 47 species
Solyc07g008600.1.1 Solyc07g008600 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc07g008620.1.1 Solyc07g008620 Receptor-like protein EIX1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc07g008630.1.1 Solyc07g008630 Receptor-like protein EIX2 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc11g056680.1.1 Solyc11g056680 DNA damage-repair/toleration protein DRT100... 0.02 OrthoFinder output from all 47 species
Spa_g14802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023003_P001 Zm00001e023003 Probable LRR receptor-like serine/threonine-protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006571 tyrosine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 289 347
IPR001611 Leu-rich_rpt 143 203
IPR013210 LRR_N_plant-typ 36 74
No external refs found!