LOC_Os08g39350.1 (SVL1, LOC_Os08g39350)


Aliases : SVL1, LOC_Os08g39350

Description : Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana (sp|q9fj62|gpdl4_arath : 653.0)


Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g39350.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g021098 SVL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056646 SVL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40029 GPDL2, SHV3, MRH5 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35833.t1 SVL5, Aspi01Gene35833 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G055800.1 SVL5, Ceric.17G055800 not classified & original description: pacid=50617674... 0.02 OrthoFinder output from all 47 species
Dac_g31142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07994 SVL4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10434415g0020 SNC4 Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4... 0.02 OrthoFinder output from all 47 species
Nbi_g43132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17680 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc02g014530.4.1 SVL4, Solyc02g014530 Glycerophosphodiester phosphodiesterase GDPDL6... 0.03 OrthoFinder output from all 47 species
Solyc07g065120.3.1 SVL1, Solyc07g065120 Glycerophosphodiester phosphodiesterase GDPDL4... 0.05 OrthoFinder output from all 47 species
Spa_g21490 SVL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025069_P001 SVL5, Zm00001e025069 Glycerophosphodiester phosphodiesterase GDPDL7... 0.02 OrthoFinder output from all 47 species
Zm00001e041063_P001 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 375 670
No external refs found!