LOC_Os08g36700.1 (HSFB4, SCZ, AT-HSFB4,...)

Aliases : HSFB4, SCZ, AT-HSFB4, LOC_Os08g36700

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g36700.1
Cluster	HCCA: Cluster_132

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00209530	HSFA1E,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
AMTR_s00073p00033500	HSFB4, SCZ,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
AMTR_s00132p00118400	HSF4, HSFB1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
AT5G03720	HSFA3, AT-HSFA3	heat shock transcription factor A3	0.03	OrthoFinder output from all 47 species
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	OrthoFinder output from all 47 species
Adi_g058298	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g076259	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g18842	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10729	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene45768.t1	HSFB4, SCZ,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene69372.t1	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0011.g012606	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: CDS=1-1191	0.02	OrthoFinder output from all 47 species
Azfi_s0062.g035157	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original...	0.04	OrthoFinder output from all 47 species
Cba_g08179	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g15368	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.29G078200.1	HSFB4, SCZ,...	HSF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g42490	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g04697	HSF4, HSFB1,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g10301	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26513	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01011632001	HSFA8, AT-HSFA8	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
MA_8845456g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
MpVg00470.1	HSFA1B, ATHSF3,...	No annotation	0.03	OrthoFinder output from all 47 species
Msp_g11547	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g24815	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g19244	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16493	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g25110	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g12831	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g13332	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g28968	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g57933	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000353	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012750	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-2229	0.02	OrthoFinder output from all 47 species
Solyc04g016000.3.1	AT-HSFB3, HSFB3,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Spa_g07151	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26714	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e009909_P001	HSFB4, SCZ,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	26	120

External Links

No external refs found!

LOC_Os08g36700.1 (HSFB4, SCZ, AT-HSFB4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation