- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : HVA22E, ATHVA22E, LOC_Os08g36440
Description : Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 197.0)
Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os08g36440.1 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G50720 | HVA22E, ATHVA22E | HVA22 homologue E | 0.03 | OrthoFinder output from all 47 species | |
| AT5G62490 | ATHVA22B, HVA22B | HVA22 homologue B | 0.13 | OrthoFinder output from all 47 species | |
| Aspi01Gene00262.t1 | HVA22F, Aspi01Gene00262 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g31655 | HVA22F | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08111 | HVA22F | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008576001 | HVA22E, ATHVA22E | HVA22-like protein e OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_16303 | HVA22F | HVA22-like protein f OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_24347 | HVA22F | HVA22-like protein f OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_119472g0010 | HVA22E, ATHVA22E | Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 152.0) | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g00180 | HVA22F | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10087 | HVA22F | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g37188 | HVA22F | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo38761 | HVA22E, ATHVA22E | Protein HVA22 OS=Hordeum vulgare | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g072680.4.1 | HVA22E,... | Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 148.0) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
| BP | GO:0007275 | multicellular organism development | IEP | HCCA |
| BP | GO:0009790 | embryo development | IEP | HCCA |
| BP | GO:0009793 | embryo development ending in seed dormancy | IEP | HCCA |
| BP | GO:0022414 | reproductive process | IEP | HCCA |
| BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
| BP | GO:0032502 | developmental process | IEP | HCCA |
| BP | GO:0048856 | anatomical structure development | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004345 | TB2_DP1_HVA22 | 24 | 99 |
| No external refs found! |