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  5. LOC_Os08g35060.1

LOC_Os08g35060.1 (LOC_Os08g35060)


Aliases : LOC_Os08g35060

Description : plant-specific E3 ubiquitin ligase (RSL/RFA)


Gene families : OG0000695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g35060.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00117090 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G25360 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
LOC_Os12g01230.1 LOC_Os12g01230 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e022191_P001 Zm00001e022191 plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 OrthoFinder output from all 47 species
Zm00001e034155_P001 Zm00001e034155 plant-specific E3 ubiquitin ligase (RSL/RFA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR002867 IBR_dom 265 312
IPR002867 IBR_dom 195 243
No external refs found!