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  5. LOC_Os08g34700.1

LOC_Os08g34700.1 (LSB1, GDU3, ATGDU3,...)


Aliases : LSB1, GDU3, ATGDU3, LOC_Os08g34700

Description : no hits & (original description: none)


Gene families : OG0001295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g34700.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00263100 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G31730 GDU1 glutamine dumper 1 0.03 OrthoFinder output from all 47 species
AT5G24920 GDU5, AtGDU5 glutamine dumper 5 0.02 OrthoFinder output from all 47 species
Dac_g18010 GDU5, AtGDU5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14090 GDU5, AtGDU5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_30729 GDU5, AtGDU5 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g44420.1 LSB1, GDU3,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10310271g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10429436g0020 AtGDU4, GDU4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_127138g0010 GDU5, AtGDU5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_132385g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2292g0010 GDU1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_262g0010 GDU5, AtGDU5 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_279651g0010 LSB1, GDU3, ATGDU3 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_389101g0010 GDU5, AtGDU5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_435459g0010 AtGDU4, GDU4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_45286g0010 LSB1, GDU3, ATGDU3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_455359g0010 GDU5, AtGDU5 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_49468g0010 ATGDU2, GDU2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_79500g0010 AtGDU4, GDU4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8869g0010 GDU1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9356847g0010 AtGDU4, GDU4 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_956097g0010 AtGDU4, GDU4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g08969 AtGDU6, GDU6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18339 GDU5, AtGDU5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g089460.1.1 AtGDU6, GDU6,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g089470.1.1 AtGDU6, GDU6,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g114620.1.1 Solyc03g114620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g006600.1.1 LSB1, GDU3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g006520.1.1 GDU1, Solyc08g006520 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g096490.1.1 GDU5, AtGDU5,... Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g11602 GDU5, AtGDU5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004070_P001 LSB1, GDU3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e013948_P001 Zm00001e013948 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e022181_P001 LSB1, GDU3,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e037530_P001 Zm00001e037530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037710_P001 AtGDU4, GDU4,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!