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  5. LOC_Os08g33740.1

LOC_Os08g33740.1 (ATCSLA9, RAT4,...)


Aliases : ATCSLA9, RAT4, ATCSLA09, CSLA09, CSLA9, LOC_Os08g33740

Description : mannan synthase (CSLA)


Gene families : OG0000269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g33740.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00054150 ATCSLC12,... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.04 OrthoFinder output from all 47 species
AT3G28180 ATCSLC04,... Cellulose-synthase-like C4 0.03 OrthoFinder output from all 47 species
Adi_g100989 ATCSLC12, CSLC12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20967 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15281 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11091 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07706 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01025737001 ATCSLA9, RAT4,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.01 OrthoFinder output from all 47 species
Gb_35783 ATCSLC05,... 1,4-beta-glucan synthase (CSLC) 0.01 OrthoFinder output from all 47 species
MA_712121g0010 CSLC6, ATCSLC06,... Probable xyloglucan glycosyltransferase 9 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Msp_g14207 ATCSLC05,... EC_2.4 glycosyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g43063 ATCSLC05,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01004 ATCSLA9, RAT4,... EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 235 439
No external refs found!