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  5. LOC_Os08g33720.1

LOC_Os08g33720.1 (MDH, LOC_Os08g33720)


Aliases : MDH, LOC_Os08g33720

Description : malate dehydrogenase component of AAA-ATPase motor complex


Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g33720.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00085320 PMDH1,... Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder output from all 47 species
Ala_g37775 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Cba_g15037 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Cre10.g423250 PMDH1 Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Gb_04596 MDH malate dehydrogenase component of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Len_g09181 MDH malate dehydrogenase component of AAA-ATPase motor... 0.03 OrthoFinder output from all 47 species
Len_g19337 mMDH1 mitochondrial NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
MA_10431009g0010 MDH malate dehydrogenase component of AAA-ATPase motor complex 0.03 OrthoFinder output from all 47 species
Pp3c11_3740V3.1 PMDH1, Pp3c11_3740 peroxisomal NAD-malate dehydrogenase 1 0.01 OrthoFinder output from all 47 species
Smo133026 MDH Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g115990.3.1 MDH, Solyc03g115990 malate dehydrogenase component of AAA-ATPase motor complex 0.03 OrthoFinder output from all 47 species
Solyc07g062650.4.1 mMDH1, Solyc07g062650 mitochondrial NAD-dependent malate dehydrogenase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR022383 Lactate/malate_DH_C 221 387
IPR001236 Lactate/malate_DH_N 76 219
No external refs found!