1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g33590.1

LOC_Os08g33590.1 (LOC_Os08g33590)


Aliases : LOC_Os08g33590

Description : transcription factor (bHLH)


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g33590.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00019320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G68810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G25710 BHLH32, ATAIG1, TMO5 basic helix-loop-helix 32 0.05 OrthoFinder output from all 47 species
Adi_g071759 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18451 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36805 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06352.t1 Aspi01Gene06352 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025937 No alias bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Cba_g62323 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13418 No alias bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01011960001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01020688001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
MA_65818g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Pnu_g11508 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g006990.3.1 Solyc04g006990 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc04g014360.3.1 Solyc04g014360 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc04g076240.3.1 Solyc04g076240 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc05g009880.3.1 Solyc05g009880 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Solyc10g078380.2.1 Solyc10g078380 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e001119_P001 Zm00001e001119 transcription factor (bHLH) 0.1 OrthoFinder output from all 47 species
Zm00001e006132_P001 Zm00001e006132 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e009812_P001 Zm00001e009812 transcription factor (bHLH) 0.13 OrthoFinder output from all 47 species
Zm00001e009972_P001 Zm00001e009972 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e022445_P001 Zm00001e022445 transcription factor (bHLH) 0.11 OrthoFinder output from all 47 species
Zm00001e034395_P001 Zm00001e034395 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e038535_P001 Zm00001e038535 transcription factor (bHLH) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 123 170
No external refs found!