LOC_Os08g30070.1 (LOC_Os08g30070)


Aliases : LOC_Os08g30070

Description : Protein unc-13 homolog OS=Arabidopsis thaliana (sp|q8rx56|unc13_arath : 230.0)


Gene families : OG0000883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g30070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00188350 evm_27.TU.AmTr_v1... Protein unc-13 homolog OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00045160 evm_27.TU.AmTr_v1... Protein unc-13 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G25800 No alias Protein of unknown function (DUF810) 0.06 OrthoFinder output from all 47 species
Adi_g103345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02574 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ala_g02603 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Als_g05748 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Als_g12632 No alias regulatory protein *(PATROL1) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Aop_g06979 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34943.t1 Aspi01Gene34943 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03416 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dde_g39400 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ehy_g01671 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
GSVIVT01036645001 No alias Protein unc-13 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g01389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16187 No alias regulatory protein *(PATROL1) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Lfl_g12110 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
MA_10436391g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_12587g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_165845g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_715866g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8904731g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g07000.1 No alias regulatory protein (PATROL1) of CSC trafficking 0.02 OrthoFinder output from all 47 species
Nbi_g03194 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Nbi_g10306 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g005630.3.1 Solyc03g005630 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g066600.4.1 Solyc08g066600 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g06397 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e004190_P001 Zm00001e004190 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!