1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g29510.1

LOC_Os08g29510.1 (LOC_Os08g29510)


Aliases : LOC_Os08g29510

Description : Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana (sp|q9lig0|y3136_arath : 209.0)


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g29510.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00129830 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00130010 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00131920 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.14 OrthoFinder output from all 47 species
AMTR_s00071p00133060 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00133840 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.13 OrthoFinder output from all 47 species
Aev_g10477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18017.t1 Aspi01Gene18017 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18018.t1 Aspi01Gene18018 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21751.t1 Aspi01Gene21751 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011970001 No alias Clavaminate synthase-like protein At3g21360... 0.05 OrthoFinder output from all 47 species
Gb_08596 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Gb_16261 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Gb_16281 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Gb_33797 No alias Clavaminate synthase-like protein At3g21360... 0.1 OrthoFinder output from all 47 species
Gb_34217 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Lfl_g08509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g38665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427711g0010 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_10435582g0010 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
MA_20531g0020 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_867753g0010 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Ore_g25382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 43 319
No external refs found!