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  5. LOC_Os08g28170.1

LOC_Os08g28170.1 (LOC_Os08g28170)


Aliases : LOC_Os08g28170

Description : solute transporter (NAT)


Gene families : OG0000475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g28170.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00102240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AMTR_s00151p00089770 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AT5G62890 No alias Xanthine/uracil permease family protein 0.03 OrthoFinder output from all 47 species
Adi_g074683 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14570 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16647 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G071100.1 Ceric.09G071100 solute transporter *(NAT) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g12691 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05844 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24459 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_40643 No alias solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
LOC_Os08g32500.1 LOC_Os08g32500 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
LOC_Os09g15170.1 LOC_Os09g15170 solute transporter (NAT) 0.07 OrthoFinder output from all 47 species
Mp8g05640.1 No alias solute transporter (NAT) 0.04 OrthoFinder output from all 47 species
Mp8g07270.1 No alias solute transporter (NAT) 0.05 OrthoFinder output from all 47 species
Mp8g07280.1 No alias solute transporter (NAT) 0.05 OrthoFinder output from all 47 species
Msp_g03175 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13499 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05350 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07259 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10442 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07136 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02988 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09619 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo133065 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Solyc02g072500.3.1 Solyc02g072500 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species
Solyc06g071330.4.1 Solyc06g071330 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Tin_g02025 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004232_P002 Zm00001e004232 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species
Zm00001e029011_P005 Zm00001e029011 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR006043 NCS2 20 244
No external refs found!