LOC_Os08g27090.1 (emb1129, LOC_Os08g27090)

Aliases : emb1129, LOC_Os08g27090

Description : component mtRPS17 of small ribosomal subunit proteome

Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g27090.1
Cluster	HCCA: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method
Adi_g077848	emb1129	component *(uS17m) of small mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Aev_g19246	emb1129	component *(uS17m) of small mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Azfi_s0095.g043585	emb1129	component *(uS17m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001307.5	No alias	No description available	0.01	OrthoFinder output from all 47 species
Cre02.g118950	emb1129	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
Lfl_g00314	emb1129	component *(uS17m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
MA_598246g0010	emb1129	component mtRPS17 of small ribosomal subunit proteome	0.12	OrthoFinder output from all 47 species
Spa_g21991	emb1129	component *(uS17m) of small mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Zm00001e022163_P001	emb1129, Zm00001e022163	component mtRPS17 of small ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008097	5S rRNA binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000266	Ribosomal_S17/S11	6	73

External Links

No external refs found!

LOC_Os08g27090.1 (emb1129, LOC_Os08g27090)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation