LOC_Os08g44790 (Os08g0561900)


Aliases : Os08g0561900

Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. EXP3


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g44790
Cluster HCCA cluster: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Gene family
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Gene family
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 Gene family
AT3G15370 ATHEXP ALPHA... expansin 12 0.02 Gene family
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 Gene family
Cre14.g631950 No alias No description available 0.01 Gene family
GSVIVT01008762001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01011437001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
GSVIVT01029411001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
GSVIVT01032681001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01033691001 No alias 10.7 cell wall.modification putative expansin. Naming... 0.15 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os01g60770 Os01g0823100 10.7 cell wall.modification Member of Alpha-Expansin... 0.01 Gene family
LOC_Os02g16780 Os02g0267700 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g06050 Os03g0156000 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g06060 Os03g0156300 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g31480 Os03g0428700 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os04g15840 Os04g0228400 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os06g41700 Os06g0621900 10.7 cell wall.modification expansin -like protein.... 0.03 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os10g39110 Os10g0535900 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
MA_10425823g0010 No alias 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
MA_30127g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
MA_36587g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
MA_915221g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo143857 PACid_15418621 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Smo236978 PACid_15412986 10.7 cell wall.modification expansin-like protein.... 0.01 Gene family
Solyc01g010890.3.1 Solyc01g010890.3 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc04g081870.3.1 Solyc04g081870.3 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc06g051800.3.1 Solyc06g051800.3 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Solyc08g080060.3.1 Solyc08g080060.3 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Solyc09g010860.3.1 Solyc09g010860.3 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc10g084780.2.1 Solyc10g084780.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d018031 GRMZM2G105844 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Zm00001d027718 GRMZM2G073373 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family
Zm00001d031904 GRMZM2G139695 10.7 cell wall.modification member of Alpha-Expansin... 0.06 Gene family
Zm00001d031906 GRMZM2G030531 10.7 cell wall.modification member of Alpha-Expansin... 0.12 Gene family
Zm00001d031907 GRMZM2G106899 10.7 cell wall.modification member of Alpha-Expansin... 0.16 Gene family
Zm00001d032882 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d034663 GRMZM2G368886 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d035111 GRMZM2G064174 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d040247 GRMZM2G094523 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Zm00001d040249 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d047353 GRMZM2G127029 10.7 cell wall.modification Member of Alpha-Expansin... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 77 164
IPR007117 Expansin_CBD 175 253
No external refs found!