LOC_Os08g23990.1 (LOC_Os08g23990)


Aliases : LOC_Os08g23990

Description : no hits & (original description: none)


Gene families : OG0001023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g23990.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g06200.1 LOC_Os01g06200 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os01g15190.1 LOC_Os01g15190 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g19660.1 LOC_Os01g19660 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g29370.1 LOC_Os01g29370 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os01g35080.1 LOC_Os01g35080 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g39360.1 LOC_Os01g39360 no hits & (original description: none) 0.22 OrthoFinder output from all 47 species
LOC_Os01g41500.1 LOC_Os01g41500 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g66450.1 LOC_Os01g66450 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os02g20070.1 LOC_Os02g20070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g25140.1 LOC_Os02g25140 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g25440.1 LOC_Os02g25440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g27630.1 LOC_Os02g27630 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g33260.1 LOC_Os02g33260 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os02g49890.1 LOC_Os02g49890 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g03220.1 LOC_Os03g03220 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g04790.1 LOC_Os03g04790 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g29660.1 LOC_Os03g29660 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os03g31640.1 LOC_Os03g31640 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g36470.1 LOC_Os03g36470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g01190.1 LOC_Os04g01190 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g09710.1 LOC_Os04g09710 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g17720.1 LOC_Os04g17720 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g19910.1 LOC_Os04g19910 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os04g21380.1 LOC_Os04g21380 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os04g23780.1 LOC_Os04g23780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g24390.1 LOC_Os04g24390 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os04g28900.1 LOC_Os04g28900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g43480.1 LOC_Os04g43480 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os05g17040.1 LOC_Os05g17040 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os05g17870.1 LOC_Os05g17870 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g17970.1 LOC_Os05g17970 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os05g20370.1 LOC_Os05g20370 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
LOC_Os05g20820.1 LOC_Os05g20820 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os05g23280.1 LOC_Os05g23280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g24840.1 LOC_Os05g24840 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os05g28560.1 LOC_Os05g28560 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os05g32040.1 LOC_Os05g32040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g12720.1 LOC_Os06g12720 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g15110.1 LOC_Os06g15110 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os06g22790.1 LOC_Os06g22790 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g23080.1 LOC_Os06g23080 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g25630.1 LOC_Os06g25630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g27950.1 LOC_Os06g27950 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os06g29060.1 LOC_Os06g29060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g33300.1 LOC_Os06g33300 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g35380.1 LOC_Os06g35380 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g36140.1 LOC_Os06g36140 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g37520.1 LOC_Os06g37520 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g11230.1 LOC_Os07g11230 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
LOC_Os07g13690.1 LOC_Os07g13690 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g14950.1 LOC_Os07g14950 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g18200.1 LOC_Os07g18200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g20690.1 LOC_Os07g20690 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os07g27690.1 LOC_Os07g27690 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g27820.1 LOC_Os07g27820 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g44520.1 LOC_Os07g44520 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os08g03210.1 LOC_Os08g03210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g07230.1 LOC_Os08g07230 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os08g13500.1 LOC_Os08g13500 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os08g13560.1 LOC_Os08g13560 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g19460.1 LOC_Os08g19460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g04540.1 LOC_Os09g04540 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os09g07250.1 LOC_Os09g07250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g07690.1 LOC_Os09g07690 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os09g11950.1 LOC_Os09g11950 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g15140.1 LOC_Os09g15140 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g16690.1 LOC_Os09g16690 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g01350.1 LOC_Os10g01350 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os10g11930.1 LOC_Os10g11930 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os10g22260.1 LOC_Os10g22260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g24770.1 LOC_Os10g24770 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os11g22020.1 LOC_Os11g22020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g22710.1 LOC_Os11g22710 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os11g23090.1 LOC_Os11g23090 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
LOC_Os11g28560.1 LOC_Os11g28560 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os11g28790.1 LOC_Os11g28790 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g29450.1 LOC_Os11g29450 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g33060.1 LOC_Os11g33060 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g35690.1 LOC_Os11g35690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g05500.1 LOC_Os12g05500 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g16820.1 LOC_Os12g16820 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os12g16960.1 LOC_Os12g16960 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g20350.1 LOC_Os12g20350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g23010.1 LOC_Os12g23010 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g23540.1 LOC_Os12g23540 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g23640.1 LOC_Os12g23640 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os12g26740.1 LOC_Os12g26740 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g28280.1 LOC_Os12g28280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g28340.1 LOC_Os12g28340 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g43280.1 LOC_Os12g43280 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001878 Znf_CCHC 580 596
IPR001878 Znf_CCHC 467 483
No external refs found!