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  5. LOC_Os08g21760.1

LOC_Os08g21760.1 (ATRER1A, LOC_Os08g21760)


Aliases : ATRER1A, LOC_Os08g21760

Description : Protein RER1A OS=Arabidopsis thaliana (sp|o48670|rer1a_arath : 221.0)


Gene families : OG0001450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g21760.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G084800.1 ATRER1A, Ceric.23G084800 membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.65 ATRER1C1 Protein RER1C OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g11965 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Mp2g00750.1 ATRER1A Protein RER1A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g13546 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e013219_P001 ATRER1A, Zm00001e013219 Protein RER1A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e017155_P001 ATRER1A, Zm00001e017155 Protein RER1A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR004932 Rer1 39 201
No external refs found!