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  5. LOC_Os08g21700.1

LOC_Os08g21700.1 (LOC_Os08g21700)


Aliases : LOC_Os08g21700

Description : Protein DCL, chloroplastic OS=Solanum lycopersicum (sp|q42463|dcl_sollc : 122.0)


Gene families : OG0001145 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g21700.1

Target Alias Description ECC score Gene Family Method Actions
AT1G45230 No alias Protein of unknown function (DUF3223) 0.03 OrthoFinder output from all 47 species
Cre02.g085950 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01009433001 No alias Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04575 No alias Protein DCL homolog, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Smo448611 No alias Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g078480.3.1 Solyc04g078480 Protein DCL, chloroplastic OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc04g078850.4.1 Solyc04g078850 Protein DCL, chloroplastic OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Zm00001e023814_P002 Zm00001e023814 Protein DCL, chloroplastic OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!