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Aliases : SMG7, LOC_Os08g21350
Description : SMG7 Nonsense-Mediated mRNA Decay protein
Gene families : OG0001313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001313_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00046p00170580 | SMG7,... | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G28260 | No alias | Telomerase activating protein Est1 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G19400 | SMG7 | Telomerase activating protein Est1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g021472 | SMG7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g23897 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g62611 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene18431.t1 | SMG7, Aspi01Gene18431 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g015951 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0113.g045981 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G021400.1 | SMG7, Ceric.27G021400 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000944.14 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g12623 | SMG7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12458 | SMG7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01007284001 | No alias | Protein SMG7L OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01033622001 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01037278001 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_32124 | SMG7 | Protein SMG7 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g48171 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10435713g0020 | SMG7 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g12080.1 | SMG7 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18455 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g36629 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07512 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003478 | SMG7 | not classified & original description: CDS=237-2600 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25590 | No alias | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo410159 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g078020.3.1 | Solyc02g078020 | Protein SMG7L OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g22093 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009613_P002 | SMG7, Zm00001e009613 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006914 | autophagy | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
| No external refs found! |